Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A319D1X9

Protein Details
Accession A0A319D1X9    Localization Confidence Medium Confidence Score 10.9
NoLS Segment(s)
PositionSequenceProtein Nature
66-85DDTPKPKNKARKEADRGGRGBasic
NLS Segment(s)
PositionSequence
70-105KPKNKARKEADRGGRGGRGGPRGRGRGRGRGRGRGF
Subcellular Location(s) cyto_nucl 11.5, nucl 10.5, mito 9, cyto 5.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0003723  F:RNA binding  
GO:0000387  P:spliceosomal snRNP assembly  
GO:0008033  P:tRNA processing  
Pfam View protein in Pfam  
PF01423  LSM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MQCGVGTILHGTITSVSPQMNTSLRTVKMTPKGRDPIGLDTINIRGSTIRYYILPDSLPLDTLLIDDTPKPKNKARKEADRGGRGGRGGPRGRGRGRGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.09
2 0.1
3 0.1
4 0.1
5 0.11
6 0.14
7 0.15
8 0.16
9 0.18
10 0.22
11 0.23
12 0.25
13 0.26
14 0.3
15 0.37
16 0.44
17 0.44
18 0.46
19 0.5
20 0.48
21 0.5
22 0.46
23 0.41
24 0.38
25 0.35
26 0.27
27 0.23
28 0.24
29 0.21
30 0.18
31 0.13
32 0.08
33 0.09
34 0.1
35 0.09
36 0.09
37 0.08
38 0.1
39 0.11
40 0.11
41 0.1
42 0.09
43 0.1
44 0.1
45 0.1
46 0.08
47 0.07
48 0.06
49 0.06
50 0.07
51 0.05
52 0.05
53 0.06
54 0.09
55 0.14
56 0.19
57 0.23
58 0.29
59 0.39
60 0.47
61 0.57
62 0.62
63 0.69
64 0.72
65 0.78
66 0.81
67 0.77
68 0.71
69 0.63
70 0.57
71 0.46
72 0.43
73 0.38
74 0.37
75 0.35
76 0.4
77 0.44
78 0.5
79 0.52
80 0.58
81 0.59
82 0.61
83 0.67
84 0.7
85 0.69