Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A316YVW8

Protein Details
Accession A0A316YVW8    Localization Confidence Medium Confidence Score 11.6
NoLS Segment(s)
PositionSequenceProtein Nature
91-110TQRPINMRKTVIKRRKRVPAHydrophilic
NLS Segment(s)
PositionSequence
101-109VIKRRKRVP
Subcellular Location(s) nucl 17, mito_nucl 12.833, cyto_nucl 9.833, mito 7.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR039355  Transcription_factor_GATA  
IPR000679  Znf_GATA  
IPR013088  Znf_NHR/GATA  
Gene Ontology GO:0005634  C:nucleus  
GO:0003700  F:DNA-binding transcription factor activity  
GO:0043565  F:sequence-specific DNA binding  
GO:0008270  F:zinc ion binding  
GO:0006357  P:regulation of transcription by RNA polymerase II  
Pfam View protein in Pfam  
PF00320  GATA  
PROSITE View protein in PROSITE  
PS00344  GATA_ZN_FINGER_1  
PS50114  GATA_ZN_FINGER_2  
CDD cd00202  ZnF_GATA  
Amino Acid Sequences MRCSNCGTMRTPLWRRSPDGSSLCNKCGASSSSNGAGISGGVGGTAGGEEEAVGGLKCNNCGTTTTPLWRRDENGNNICNACGLYQKLHGTQRPINMRKTVIKRRKRVPA
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.58
2 0.59
3 0.58
4 0.57
5 0.55
6 0.53
7 0.5
8 0.49
9 0.49
10 0.45
11 0.43
12 0.4
13 0.32
14 0.31
15 0.28
16 0.23
17 0.21
18 0.23
19 0.21
20 0.22
21 0.21
22 0.17
23 0.15
24 0.12
25 0.09
26 0.06
27 0.04
28 0.03
29 0.03
30 0.02
31 0.02
32 0.02
33 0.02
34 0.02
35 0.02
36 0.02
37 0.02
38 0.02
39 0.02
40 0.02
41 0.03
42 0.04
43 0.05
44 0.05
45 0.06
46 0.06
47 0.07
48 0.09
49 0.12
50 0.16
51 0.18
52 0.24
53 0.3
54 0.33
55 0.36
56 0.36
57 0.36
58 0.38
59 0.44
60 0.48
61 0.47
62 0.45
63 0.43
64 0.42
65 0.39
66 0.31
67 0.24
68 0.15
69 0.12
70 0.12
71 0.12
72 0.17
73 0.19
74 0.24
75 0.3
76 0.33
77 0.36
78 0.39
79 0.46
80 0.52
81 0.54
82 0.54
83 0.53
84 0.55
85 0.58
86 0.63
87 0.66
88 0.66
89 0.71
90 0.76