A0A179ISX8

UniProt ID: A0A179ISX8   Organism: Cordyceps confragosa
Gene: LLEC1_05309   Protein: Small nuclear ribonucleoprotein Sm D1
Length: 144 AA

Protein Details

• Accession: A0A179ISX8
• Localization Confidence: Medium
• Confidence Score: 10.7
• NoLS Segment(s):

  Position	Sequence	Protein Nature
  82-101	DDQPKPKNKARKEAERATRG	Basic

• NLS Segment(s):

  Position	Sequence
  86-119	KPKNKARKEAERATRGRGGPRGRGRGRGRGRGRP

• Subcellular Location(s): nucl 10, cyto_nucl 10, mito 9, cyto 8
• Family & Domain DBs:
  • InterPro:
    • IPR027141 LSm4/Sm_D1/D3
    • IPR010920 LSM_dom_sf
    • IPR047575 Sm
    • IPR034102 Sm_D1
    • IPR001163 Sm_dom_euk/arc
  • Gene Ontology:
    • GO:0005634 C:nucleus
    • GO:1990904 C:ribonucleoprotein complex
    • GO:0120114 C:Sm-like protein family complex
    • GO:0000387 P:spliceosomal snRNP assembly
  • Pfam:
    • PF01423 LSM
  • PROSITE:
    • PS52002 SM
  • CDD:
    • cd01724 Sm_D1
• Amino Acid Sequences: MKLVRFLMKCVNEPVTIELKNGTIVNGTIASVTPQMNTALRTVKMTPKGQEPISLDTMNIRGSTIRYFILPDSLPLDTLLVDDQPKPKNKARKEAERATRGRGGPRGRGRGRGRGRGRP

NoLS Predictions per Residue - Data Table

Residue Number, Score
1, 0.35
2, 0.32
3, 0.29
4, 0.26
5, 0.22
6, 0.19
7, 0.2
8, 0.19
9, 0.15
10, 0.1
11, 0.1
12, 0.1
13, 0.1
14, 0.09
15, 0.07
16, 0.07
17, 0.08
18, 0.09
19, 0.09
20, 0.08
21, 0.09
22, 0.1
23, 0.11
24, 0.11
25, 0.12
26, 0.14
27, 0.14
28, 0.16
29, 0.17
30, 0.21
31, 0.27
32, 0.29
33, 0.29
34, 0.31
35, 0.34
36, 0.32
37, 0.34
38, 0.31
39, 0.29
40, 0.3
41, 0.28
42, 0.22
43, 0.19
44, 0.2
45, 0.16
46, 0.13
47, 0.09
48, 0.06
49, 0.07
50, 0.08
51, 0.09
52, 0.08
53, 0.08
54, 0.09
55, 0.09
56, 0.11
57, 0.1
58, 0.1
59, 0.11
60, 0.11
61, 0.11
62, 0.1
63, 0.1
64, 0.07
65, 0.08
66, 0.07
67, 0.06
68, 0.07
69, 0.09
70, 0.14
71, 0.2
72, 0.26
73, 0.31
74, 0.38
75, 0.47
76, 0.52
77, 0.61
78, 0.65
79, 0.7
80, 0.73
81, 0.78
82, 0.8
83, 0.8
84, 0.76
85, 0.72
86, 0.7
87, 0.61
88, 0.58
89, 0.56
90, 0.52
91, 0.52
92, 0.59
93, 0.63
94, 0.59
95, 0.67
96, 0.67
97, 0.7
98, 0.73
99, 0.74