Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A168DJH2

Protein Details
Accession A0A168DJH2    Localization Confidence Medium Confidence Score 10.4
NoLS Segment(s)
PositionSequenceProtein Nature
81-102VDDTPKPKNKARKEQDRGGRGGBasic
NLS Segment(s)
PositionSequence
86-121KPKNKARKEQDRGGRGGRGAPRGGGRGRGRGRGRGF
Subcellular Location(s) cyto_nucl 10.833, nucl 10.5, cyto 10, mito 6, cyto_pero 5.833
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0003723  F:RNA binding  
GO:0000387  P:spliceosomal snRNP assembly  
GO:0008033  P:tRNA processing  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKCTNETVTIELKDGTIVHGTIMSVSPQMNTALRAVKMTPKNRDPIPLDTINIRGSTVRYIILPDSLPLDTLLVDDTPKPKNKARKEQDRGGRGGRGAPRGGGRGRGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.34
2 0.29
3 0.25
4 0.25
5 0.21
6 0.18
7 0.17
8 0.15
9 0.14
10 0.1
11 0.09
12 0.08
13 0.09
14 0.08
15 0.08
16 0.09
17 0.07
18 0.07
19 0.07
20 0.07
21 0.08
22 0.09
23 0.09
24 0.1
25 0.11
26 0.13
27 0.13
28 0.14
29 0.14
30 0.2
31 0.27
32 0.32
33 0.37
34 0.38
35 0.42
36 0.42
37 0.48
38 0.44
39 0.41
40 0.4
41 0.34
42 0.32
43 0.28
44 0.29
45 0.24
46 0.2
47 0.15
48 0.1
49 0.09
50 0.1
51 0.09
52 0.08
53 0.07
54 0.08
55 0.08
56 0.09
57 0.08
58 0.08
59 0.09
60 0.08
61 0.09
62 0.08
63 0.07
64 0.06
65 0.06
66 0.07
67 0.05
68 0.06
69 0.07
70 0.1
71 0.15
72 0.2
73 0.25
74 0.3
75 0.4
76 0.5
77 0.6
78 0.67
79 0.73
80 0.76
81 0.82
82 0.85
83 0.81
84 0.76
85 0.68
86 0.61
87 0.51
88 0.49
89 0.45
90 0.39
91 0.34
92 0.32
93 0.31
94 0.33
95 0.34
96 0.37
97 0.35
98 0.41
99 0.44
100 0.51
101 0.53