Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A2P7YYC6

Protein Details
Accession A0A2P7YYC6    Localization Confidence Low Confidence Score 9.7
NoLS Segment(s)
PositionSequenceProtein Nature
87-106KPGEKPKPPVRGPPPKRTKHBasic
NLS Segment(s)
PositionSequence
88-106PGEKPKPPVRGPPPKRTKH
Subcellular Location(s) cyto 17, cyto_nucl 13.333, nucl 7.5, mito_nucl 5.666
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR001163  Sm_dom_euk/arc  
IPR034099  SmD3  
Gene Ontology GO:0000243  C:commitment complex  
GO:0005829  C:cytosol  
GO:0071014  C:post-mRNA release spliceosomal complex  
GO:0005685  C:U1 snRNP  
GO:0005686  C:U2 snRNP  
GO:0071004  C:U2-type prespliceosome  
GO:0005687  C:U4 snRNP  
GO:0046540  C:U4/U6 x U5 tri-snRNP complex  
GO:0005682  C:U5 snRNP  
GO:0003729  F:mRNA binding  
GO:0036261  P:7-methylguanosine cap hypermethylation  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01721  Sm_D3  
Amino Acid Sequences MSTGIPIKLLNEAQGHVVSLELTNGDTYRGKLQESEDNMNLSLGDVTITKGKTGETTHKGQVFVRGSMIRFVSVPDILQYAPMFFMKPGEKPKPPVRGPPPKRTKH
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.19
2 0.18
3 0.13
4 0.13
5 0.1
6 0.08
7 0.08
8 0.06
9 0.06
10 0.06
11 0.06
12 0.08
13 0.09
14 0.1
15 0.15
16 0.16
17 0.16
18 0.17
19 0.2
20 0.25
21 0.29
22 0.32
23 0.28
24 0.28
25 0.28
26 0.26
27 0.23
28 0.16
29 0.11
30 0.06
31 0.05
32 0.04
33 0.05
34 0.08
35 0.08
36 0.08
37 0.08
38 0.08
39 0.1
40 0.12
41 0.18
42 0.19
43 0.23
44 0.27
45 0.29
46 0.3
47 0.28
48 0.33
49 0.28
50 0.25
51 0.24
52 0.22
53 0.2
54 0.21
55 0.21
56 0.14
57 0.12
58 0.13
59 0.12
60 0.11
61 0.1
62 0.09
63 0.09
64 0.09
65 0.1
66 0.1
67 0.08
68 0.09
69 0.09
70 0.09
71 0.08
72 0.13
73 0.13
74 0.19
75 0.27
76 0.34
77 0.38
78 0.46
79 0.54
80 0.6
81 0.62
82 0.67
83 0.69
84 0.73
85 0.76
86 0.8