Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A2S6CHV0

Protein Details
Accession A0A2S6CHV0    Localization Confidence Medium Confidence Score 10.8
NoLS Segment(s)
PositionSequenceProtein Nature
81-101IDDTPKPKNKARKEQDRSAGGHydrophilic
NLS Segment(s)
PositionSequence
86-128KPKNKARKEQDRSAGGGRGGPRGGRGGGRGGGRGRGRGRGRGF
Subcellular Location(s) mito 12, nucl 10, cyto_nucl 8.5, cyto 5
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKCTNETVTIELKTGTIVQGTIASVSPQMNTNLRNAKMTPKGGSQISLDHVSIRGSEIRYYILPDSLPLDTLLIDDTPKPKNKARKEQDRSAGGGRGGPRGGRGGGRGGGRGRGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.34
2 0.28
3 0.25
4 0.24
5 0.2
6 0.17
7 0.15
8 0.15
9 0.12
10 0.08
11 0.07
12 0.07
13 0.08
14 0.08
15 0.08
16 0.07
17 0.07
18 0.08
19 0.09
20 0.09
21 0.1
22 0.12
23 0.14
24 0.15
25 0.2
26 0.25
27 0.25
28 0.27
29 0.26
30 0.3
31 0.33
32 0.35
33 0.31
34 0.27
35 0.3
36 0.28
37 0.28
38 0.22
39 0.18
40 0.18
41 0.18
42 0.16
43 0.13
44 0.13
45 0.11
46 0.1
47 0.1
48 0.09
49 0.08
50 0.09
51 0.09
52 0.1
53 0.1
54 0.11
55 0.11
56 0.09
57 0.09
58 0.08
59 0.1
60 0.09
61 0.09
62 0.07
63 0.07
64 0.06
65 0.07
66 0.07
67 0.05
68 0.06
69 0.06
70 0.1
71 0.14
72 0.19
73 0.23
74 0.29
75 0.39
76 0.48
77 0.58
78 0.65
79 0.72
80 0.75
81 0.8
82 0.83
83 0.76
84 0.7
85 0.62
86 0.55
87 0.44
88 0.39
89 0.32
90 0.27
91 0.24
92 0.2
93 0.19
94 0.18
95 0.19
96 0.17
97 0.18
98 0.18
99 0.22
100 0.23
101 0.25
102 0.24
103 0.31
104 0.31
105 0.37
106 0.36
107 0.41
108 0.44