Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A1X2IRM4

Protein Details
Accession A0A1X2IRM4    Localization Confidence Medium Confidence Score 13.2
NoLS Segment(s)
PositionSequenceProtein Nature
92-112LDHLKLCSGKNKSKQKKKKAIHydrophilic
NLS Segment(s)
PositionSequence
101-112KNKSKQKKKKAI
Subcellular Location(s) nucl 20, cyto_nucl 13.5, cyto 5
Family & Domain DBs
InterPro View protein in InterPro  
IPR033896  MADS_MEF2-like  
IPR002100  TF_MADSbox  
IPR036879  TF_MADSbox_sf  
Gene Ontology GO:0005634  C:nucleus  
GO:0046983  F:protein dimerization activity  
GO:0000977  F:RNA polymerase II transcription regulatory region sequence-specific DNA binding  
GO:0006351  P:DNA-templated transcription  
GO:0045944  P:positive regulation of transcription by RNA polymerase II  
Pfam View protein in Pfam  
PF00319  SRF-TF  
PROSITE View protein in PROSITE  
PS00350  MADS_BOX_1  
PS50066  MADS_BOX_2  
CDD cd00265  MADS_MEF2_like  
Amino Acid Sequences MGRKKIKIQPIEDERNKQVTFLKRKHGLMKKAYELSVLCNCEVAVVIFSSNNKLIQYSSDDMDKILMKYTQHNEPHETKSNADVSESRKQSLDHLKLCSGKNKSKQKKKKAI
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.67
2 0.66
3 0.61
4 0.52
5 0.49
6 0.48
7 0.52
8 0.51
9 0.55
10 0.55
11 0.59
12 0.67
13 0.69
14 0.67
15 0.65
16 0.66
17 0.63
18 0.59
19 0.55
20 0.48
21 0.39
22 0.36
23 0.33
24 0.28
25 0.21
26 0.18
27 0.18
28 0.16
29 0.15
30 0.11
31 0.06
32 0.05
33 0.05
34 0.05
35 0.06
36 0.07
37 0.08
38 0.08
39 0.08
40 0.08
41 0.08
42 0.09
43 0.13
44 0.12
45 0.13
46 0.13
47 0.13
48 0.12
49 0.14
50 0.13
51 0.09
52 0.09
53 0.1
54 0.1
55 0.15
56 0.19
57 0.25
58 0.29
59 0.31
60 0.35
61 0.38
62 0.43
63 0.46
64 0.44
65 0.37
66 0.37
67 0.38
68 0.33
69 0.3
70 0.27
71 0.26
72 0.33
73 0.34
74 0.31
75 0.29
76 0.29
77 0.35
78 0.42
79 0.44
80 0.4
81 0.42
82 0.46
83 0.5
84 0.52
85 0.54
86 0.51
87 0.52
88 0.57
89 0.65
90 0.71
91 0.77
92 0.85