Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

B8PF21

Protein Details
Accession B8PF21    Localization Confidence Medium Confidence Score 10.9
NoLS Segment(s)
PositionSequenceProtein Nature
81-103VDDAPKPKNRKKDDARGRGRGARBasic
NLS Segment(s)
PositionSequence
85-121PKPKNRKKDDARGRGRGARGGDRARGRGRGRGRGRGF
Subcellular Location(s) cyto_nucl 12.333, nucl 12, cyto 10.5, cyto_pero 6.166
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
KEGG ppl:POSPLDRAFT_90349  -  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKLNNETVTIELKNGSVVHGTITGVDMQMNTHLKTVKLTARNREPMAHETLTIRGNTIRYFVLPDAIPLDTLLVDDAPKPKNRKKDDARGRGRGARGGDRARGRGRGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.3
2 0.25
3 0.19
4 0.17
5 0.15
6 0.13
7 0.14
8 0.13
9 0.13
10 0.1
11 0.09
12 0.1
13 0.1
14 0.1
15 0.08
16 0.09
17 0.08
18 0.07
19 0.07
20 0.06
21 0.06
22 0.1
23 0.12
24 0.12
25 0.13
26 0.14
27 0.14
28 0.16
29 0.19
30 0.21
31 0.27
32 0.31
33 0.37
34 0.43
35 0.49
36 0.49
37 0.47
38 0.45
39 0.4
40 0.41
41 0.33
42 0.26
43 0.22
44 0.23
45 0.22
46 0.18
47 0.15
48 0.1
49 0.11
50 0.11
51 0.11
52 0.09
53 0.08
54 0.1
55 0.1
56 0.11
57 0.1
58 0.1
59 0.1
60 0.1
61 0.1
62 0.08
63 0.08
64 0.05
65 0.06
66 0.05
67 0.04
68 0.04
69 0.06
70 0.1
71 0.13
72 0.19
73 0.26
74 0.32
75 0.42
76 0.49
77 0.58
78 0.64
79 0.71
80 0.77
81 0.81
82 0.84
83 0.82
84 0.81
85 0.77
86 0.69
87 0.63
88 0.56
89 0.52
90 0.51
91 0.47
92 0.49
93 0.47
94 0.52
95 0.51
96 0.55
97 0.51
98 0.53
99 0.56
100 0.59
101 0.62