Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A168SRF5

Protein Details
Accession A0A168SRF5    Localization Confidence Medium Confidence Score 12
NoLS Segment(s)
PositionSequenceProtein Nature
81-104IDDTPKARNLKKKKEDTPAGRGRGBasic
NLS Segment(s)
PositionSequence
86-117KARNLKKKKEDTPAGRGRGARGRGRGGRGGRR
Subcellular Location(s) nucl 15.5, cyto_nucl 11.5, cyto 6.5, mito 5
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKLNNESVSVELKNGTVVHGTITGVDMSMNTHLKTVKMTVKNRDPLSLDTLSIRGNNIRCVILPDSLPLDTLLIDDTPKARNLKKKKEDTPAGRGRGARGRGRGGRGGRR
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.3
2 0.25
3 0.19
4 0.17
5 0.15
6 0.13
7 0.14
8 0.13
9 0.13
10 0.1
11 0.09
12 0.1
13 0.1
14 0.1
15 0.08
16 0.09
17 0.08
18 0.07
19 0.06
20 0.05
21 0.05
22 0.09
23 0.1
24 0.09
25 0.11
26 0.11
27 0.12
28 0.13
29 0.16
30 0.2
31 0.27
32 0.32
33 0.38
34 0.45
35 0.51
36 0.51
37 0.49
38 0.44
39 0.38
40 0.39
41 0.31
42 0.24
43 0.18
44 0.18
45 0.16
46 0.14
47 0.12
48 0.1
49 0.1
50 0.12
51 0.13
52 0.12
53 0.12
54 0.15
55 0.16
56 0.15
57 0.14
58 0.13
59 0.13
60 0.13
61 0.13
62 0.1
63 0.08
64 0.07
65 0.07
66 0.07
67 0.05
68 0.05
69 0.06
70 0.07
71 0.09
72 0.13
73 0.16
74 0.21
75 0.31
76 0.41
77 0.52
78 0.61
79 0.69
80 0.74
81 0.8
82 0.85
83 0.83
84 0.83
85 0.81
86 0.75
87 0.7
88 0.62
89 0.57
90 0.55
91 0.54
92 0.5
93 0.46
94 0.51
95 0.53
96 0.56
97 0.59