Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

A0A0J8QK40

Protein Details
Accession A0A0J8QK40    Localization Confidence Medium Confidence Score 11.2
NoLS Segment(s)
PositionSequenceProtein Nature
81-103IDDTPKPKNKAKKETDRGRGRGGBasic
NLS Segment(s)
PositionSequence
86-120KPKNKAKKETDRGRGRGGPRGRGGRGRGRGRGRGF
Subcellular Location(s) nucl 11.5, mito 10, cyto_nucl 9, cyto 5.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0003723  F:RNA binding  
GO:0000387  P:spliceosomal snRNP assembly  
GO:0008033  P:tRNA processing  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKCANETVTIELKNGTILHGTIASVSPQMNTALRTVKMTPKGREPISLDTINIRGSTIRYFILPDSLPLDTLLIDDTPKPKNKAKKETDRGRGRGGPRGRGGRGRGRGRGRGF
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.32
2 0.28
3 0.25
4 0.23
5 0.21
6 0.19
7 0.19
8 0.17
9 0.14
10 0.1
11 0.09
12 0.1
13 0.09
14 0.09
15 0.08
16 0.08
17 0.08
18 0.08
19 0.08
20 0.07
21 0.08
22 0.09
23 0.1
24 0.1
25 0.11
26 0.14
27 0.14
28 0.16
29 0.17
30 0.22
31 0.29
32 0.35
33 0.35
34 0.39
35 0.44
36 0.43
37 0.44
38 0.42
39 0.38
40 0.38
41 0.36
42 0.29
43 0.24
44 0.24
45 0.21
46 0.17
47 0.12
48 0.07
49 0.08
50 0.09
51 0.09
52 0.08
53 0.08
54 0.09
55 0.09
56 0.11
57 0.1
58 0.1
59 0.11
60 0.11
61 0.11
62 0.1
63 0.1
64 0.07
65 0.07
66 0.07
67 0.05
68 0.06
69 0.07
70 0.1
71 0.15
72 0.21
73 0.25
74 0.31
75 0.41
76 0.5
77 0.6
78 0.67
79 0.73
80 0.79
81 0.84
82 0.88
83 0.88
84 0.83
85 0.79
86 0.76
87 0.68
88 0.67
89 0.62
90 0.59
91 0.57
92 0.6
93 0.57
94 0.57
95 0.6
96 0.61
97 0.65
98 0.65
99 0.66
100 0.67