Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

L8WVB2

Protein Details
Accession L8WVB2    Localization Confidence Medium Confidence Score 11.6
NoLS Segment(s)
PositionSequenceProtein Nature
82-102DDAPKPKGKKKDDARGRGRGRBasic
NLS Segment(s)
PositionSequence
85-122PKPKGKKKDDARGRGRGRGGDRGRGGGRGGPRGRGRGR
Subcellular Location(s) nucl 13.5, cyto_nucl 13, cyto 11.5
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLVRFLMKLNNETVTVELKNGSVVHGTLTGVDVQMNTHLKNVKLTSRNREPTALDTLSIRGNNIRYFVLPDALNLDALLVDDAPKPKGKKKDDARGRGRGRGGDRGRGGGRGGPRGRGRGR
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.3
2 0.25
3 0.19
4 0.17
5 0.15
6 0.13
7 0.14
8 0.13
9 0.13
10 0.1
11 0.09
12 0.1
13 0.1
14 0.1
15 0.08
16 0.09
17 0.08
18 0.07
19 0.07
20 0.06
21 0.06
22 0.1
23 0.12
24 0.11
25 0.14
26 0.16
27 0.16
28 0.2
29 0.22
30 0.25
31 0.3
32 0.35
33 0.41
34 0.48
35 0.53
36 0.51
37 0.51
38 0.45
39 0.41
40 0.42
41 0.34
42 0.24
43 0.19
44 0.19
45 0.18
46 0.17
47 0.14
48 0.09
49 0.11
50 0.11
51 0.12
52 0.11
53 0.1
54 0.12
55 0.12
56 0.13
57 0.12
58 0.11
59 0.12
60 0.12
61 0.11
62 0.09
63 0.08
64 0.05
65 0.06
66 0.06
67 0.03
68 0.04
69 0.06
70 0.08
71 0.09
72 0.14
73 0.17
74 0.23
75 0.33
76 0.38
77 0.47
78 0.55
79 0.65
80 0.71
81 0.79
82 0.8
83 0.81
84 0.8
85 0.76
86 0.69
87 0.65
88 0.59
89 0.59
90 0.55
91 0.52
92 0.5
93 0.49
94 0.47
95 0.42
96 0.39
97 0.34
98 0.34
99 0.36
100 0.36
101 0.38
102 0.41