L2GU73

UniProt ID: L2GU73   Organism: Vavraia culicis (isolate floridensis)
Gene: VCUG_01651   Protein: Sm domain-containing protein
Length: 117 AA

Protein Details

• Accession: L2GU73
• Localization Confidence: Medium
• Confidence Score: 13.2
• NoLS Segment(s):

  Position	Sequence	Protein Nature
  51-71	VTEIRKTKSKNKGVKKREGTT	Hydrophilic

• NLS Segment(s):

  Position	Sequence
  56-67	KTKSKNKGVKKR

• Subcellular Location(s): nucl 20.5, cyto_nucl 13.5, cyto 5.5
• Family & Domain DBs:
  • InterPro:
    • IPR010920 LSM_dom_sf
    • IPR047575 Sm
    • IPR027248 Sm_D2
    • IPR001163 Sm_dom_euk/arc
  • Gene Ontology:
    • GO:0005829 C:cytosol
    • GO:0030532 C:small nuclear ribonucleoprotein complex
    • GO:0006397 P:mRNA processing
    • GO:0008380 P:RNA splicing
  • Pfam:
    • PF01423 LSM
  • PROSITE:
    • PS52002 SM
• Amino Acid Sequences: MTEDEKKDKLALDFLKNIKNCPCIVNLRSNRKLCGIVRVIDHHFNMILTDVTEIRKTKSKNKGVKKREGTTVERKIKCLVLRGDNVISVCEA

NoLS Predictions per Residue - Data Table

Residue Number, Score
1, 0.41
2, 0.46
3, 0.44
4, 0.45
5, 0.42
6, 0.4
7, 0.35
8, 0.3
9, 0.31
10, 0.31
11, 0.33
12, 0.4
13, 0.44
14, 0.51
15, 0.58
16, 0.58
17, 0.55
18, 0.51
19, 0.53
20, 0.43
21, 0.42
22, 0.35
23, 0.29
24, 0.28
25, 0.31
26, 0.31
27, 0.28
28, 0.28
29, 0.2
30, 0.17
31, 0.15
32, 0.13
33, 0.1
34, 0.07
35, 0.05
36, 0.05
37, 0.06
38, 0.07
39, 0.09
40, 0.1
41, 0.11
42, 0.17
43, 0.2
44, 0.28
45, 0.38
46, 0.47
47, 0.54
48, 0.65
49, 0.74
50, 0.77
51, 0.85
52, 0.84
53, 0.78
54, 0.77
55, 0.74
56, 0.7
57, 0.7
58, 0.72
59, 0.72
60, 0.64
61, 0.62
62, 0.56
63, 0.55
64, 0.5
65, 0.47
66, 0.43
67, 0.4
68, 0.43
69, 0.46
70, 0.44
71, 0.41
72, 0.39