Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

I1CD47

Protein Details
Accession I1CD47    Localization Confidence High Confidence Score 15
NoLS Segment(s)
PositionSequenceProtein Nature
90-121ENDTQKPTTKPSKKPSKKPASKLPPPPPKETKHydrophilic
136-163RKDAVHKKKTTPPPPKKKTTVHHKKTTABasic
200-219ALRKKKPTSKLPPPPKETKEBasic
236-269RKDAVHKKKTTPPPPPKKKTTVRHKKATAHPKKSBasic
291-318RKDAVHKKKTTPPPPKKKTTVHHKKTTABasic
346-394DKRSAKKDAVHKKKTTVHKKKAATHKKKTTVHKKKAAAHKKTTVKAKATBasic
NLS Segment(s)
PositionSequence
98-398TKPSKKPSKKPASKLPPPPPKETKEPKETAEHDDKRSARKDAVHKKKTTPPPPKKKTTVHHKKTTAHPKKAAEPKKSTEPKKSAEPKETAEHNDKRSAKKDEALRKKKPTSKLPPPPKETKEPKEPKETAQPDDKRSARKDAVHKKKTTPPPPPKKKTTVRHKKATAHPKKSAEPKKSAESKETAEHDDKRSARKDAVHKKKTTPPPPKKKTTVHHKKTTAHPKKSAEPKKSAEPKKSAEPKKSAEHDDKRSAKKDAVHKKKTTVHKKKAATHKKKTTVHKKKAAAHKKTTVKAKATKEAR
Subcellular Location(s) cyto_nucl 9.333, cyto 9, nucl 8.5, cyto_mito 7.333, mito 4.5, extr 2, E.R. 2
Family & Domain DBs
InterPro View protein in InterPro  
IPR005819  H1/H5  
IPR018392  LysM_dom  
IPR036779  LysM_dom_sf  
Gene Ontology GO:0000786  C:nucleosome  
GO:0003677  F:DNA binding  
GO:0030527  F:structural constituent of chromatin  
GO:0006334  P:nucleosome assembly  
Pfam View protein in Pfam  
PF01476  LysM  
PROSITE View protein in PROSITE  
PS51782  LYSM  
CDD cd00118  LysM  
Amino Acid Sequences MRLFAVASTALSLMGIAQAASQYSHPCQKTYKAVSGDSCQSVASKYGLSKDNLSEWTQKINSKFDCDNIKPGDVICIDSVDSHSKREVKENDTQKPTTKPSKKPSKKPASKLPPPPPKETKEPKETAEHDDKRSARKDAVHKKKTTPPPPKKKTTVHHKKTTAHPKKAAEPKKSTEPKKSAEPKETAEHNDKRSAKKDEALRKKKPTSKLPPPPKETKEPKEPKETAQPDDKRSARKDAVHKKKTTPPPPPKKKTTVRHKKATAHPKKSAEPKKSAESKETAEHDDKRSARKDAVHKKKTTPPPPKKKTTVHHKKTTAHPKKSAEPKKSAEPKKSAEPKKSAEHDDKRSAKKDAVHKKKTTVHKKKAATHKKKTTVHKKKAAAHKKTTVKAKATKEARD
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.06
2 0.06
3 0.05
4 0.05
5 0.05
6 0.06
7 0.07
8 0.09
9 0.12
10 0.17
11 0.25
12 0.26
13 0.29
14 0.33
15 0.38
16 0.47
17 0.5
18 0.54
19 0.5
20 0.53
21 0.54
22 0.55
23 0.54
24 0.46
25 0.39
26 0.31
27 0.28
28 0.24
29 0.22
30 0.18
31 0.15
32 0.15
33 0.21
34 0.25
35 0.27
36 0.29
37 0.29
38 0.33
39 0.33
40 0.35
41 0.36
42 0.32
43 0.38
44 0.38
45 0.4
46 0.39
47 0.44
48 0.43
49 0.42
50 0.42
51 0.4
52 0.46
53 0.44
54 0.48
55 0.43
56 0.42
57 0.36
58 0.35
59 0.34
60 0.26
61 0.25
62 0.17
63 0.15
64 0.14
65 0.14
66 0.16
67 0.19
68 0.19
69 0.19
70 0.24
71 0.27
72 0.29
73 0.37
74 0.41
75 0.38
76 0.47
77 0.54
78 0.58
79 0.6
80 0.61
81 0.56
82 0.56
83 0.58
84 0.6
85 0.6
86 0.61
87 0.65
88 0.74
89 0.8
90 0.84
91 0.88
92 0.89
93 0.9
94 0.89
95 0.89
96 0.88
97 0.88
98 0.87
99 0.87
100 0.86
101 0.81
102 0.81
103 0.77
104 0.72
105 0.73
106 0.72
107 0.69
108 0.68
109 0.66
110 0.61
111 0.61
112 0.59
113 0.56
114 0.57
115 0.53
116 0.47
117 0.51
118 0.51
119 0.49
120 0.5
121 0.45
122 0.38
123 0.4
124 0.48
125 0.52
126 0.61
127 0.63
128 0.63
129 0.66
130 0.72
131 0.76
132 0.76
133 0.76
134 0.76
135 0.79
136 0.84
137 0.86
138 0.84
139 0.82
140 0.81
141 0.81
142 0.82
143 0.79
144 0.8
145 0.79
146 0.76
147 0.77
148 0.8
149 0.78
150 0.74
151 0.71
152 0.65
153 0.67
154 0.72
155 0.7
156 0.66
157 0.62
158 0.59
159 0.63
160 0.68
161 0.65
162 0.64
163 0.61
164 0.57
165 0.61
166 0.66
167 0.61
168 0.58
169 0.56
170 0.5
171 0.49
172 0.49
173 0.43
174 0.42
175 0.41
176 0.38
177 0.42
178 0.43
179 0.42
180 0.45
181 0.46
182 0.39
183 0.39
184 0.45
185 0.47
186 0.55
187 0.6
188 0.62
189 0.65
190 0.71
191 0.73
192 0.73
193 0.73
194 0.72
195 0.73
196 0.76
197 0.79
198 0.8
199 0.8
200 0.81
201 0.75
202 0.75
203 0.72
204 0.68
205 0.68
206 0.69
207 0.66
208 0.67
209 0.65
210 0.58
211 0.6
212 0.57
213 0.49
214 0.51
215 0.5
216 0.44
217 0.5
218 0.5
219 0.46
220 0.45
221 0.49
222 0.43
223 0.46
224 0.53
225 0.56
226 0.65
227 0.67
228 0.68
229 0.67
230 0.72
231 0.76
232 0.74
233 0.74
234 0.74
235 0.77
236 0.84
237 0.86
238 0.84
239 0.84
240 0.84
241 0.84
242 0.84
243 0.84
244 0.82
245 0.84
246 0.83
247 0.83
248 0.82
249 0.84
250 0.83
251 0.8
252 0.79
253 0.74
254 0.73
255 0.75
256 0.75
257 0.7
258 0.67
259 0.63
260 0.64
261 0.67
262 0.63
263 0.57
264 0.52
265 0.48
266 0.46
267 0.45
268 0.41
269 0.38
270 0.4
271 0.38
272 0.42
273 0.41
274 0.42
275 0.42
276 0.4
277 0.38
278 0.41
279 0.48
280 0.52
281 0.61
282 0.63
283 0.63
284 0.66
285 0.72
286 0.76
287 0.76
288 0.76
289 0.76
290 0.79
291 0.84
292 0.86
293 0.84
294 0.82
295 0.81
296 0.81
297 0.82
298 0.79
299 0.8
300 0.79
301 0.76
302 0.77
303 0.8
304 0.79
305 0.76
306 0.75
307 0.71
308 0.74
309 0.8
310 0.79
311 0.74
312 0.71
313 0.67
314 0.7
315 0.75
316 0.74
317 0.72
318 0.7
319 0.68
320 0.71
321 0.77
322 0.75
323 0.73
324 0.72
325 0.69
326 0.71
327 0.72
328 0.7
329 0.7
330 0.71
331 0.7
332 0.73
333 0.76
334 0.75
335 0.73
336 0.69
337 0.63
338 0.61
339 0.63
340 0.64
341 0.66
342 0.68
343 0.68
344 0.73
345 0.77
346 0.81
347 0.82
348 0.82
349 0.82
350 0.82
351 0.86
352 0.86
353 0.89
354 0.9
355 0.89
356 0.89
357 0.89
358 0.9
359 0.9
360 0.91
361 0.91
362 0.91
363 0.91
364 0.9
365 0.88
366 0.87
367 0.9
368 0.89
369 0.87
370 0.85
371 0.85
372 0.84
373 0.83
374 0.84
375 0.81
376 0.8
377 0.79
378 0.77
379 0.77