Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

I1CDW0

Protein Details
Accession I1CDW0    Localization Confidence Medium Confidence Score 12
NoLS Segment(s)
PositionSequenceProtein Nature
75-94DDAPKSKKKKDDDAGRGRGRBasic
NLS Segment(s)
PositionSequence
79-108KSKKKKDDDAGRGRGRGMSRGRGTRGRGRR
Subcellular Location(s) nucl 18, cyto_nucl 13.833, cyto 7.5, cyto_mito 5.166
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0005634  C:nucleus  
GO:1990904  C:ribonucleoprotein complex  
GO:0120114  C:Sm-like protein family complex  
GO:0000387  P:spliceosomal snRNP assembly  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLNNETVSVEMKNGTVVHGTITGVDMSMNTHLKTVKMTIKNRDPVSLDSLSIRGNNIRCVILPDSLPLDTLLIDDAPKSKKKKDDDAGRGRGRGMSRGRGTRGRGRR
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.14
2 0.14
3 0.11
4 0.1
5 0.11
6 0.11
7 0.11
8 0.09
9 0.1
10 0.08
11 0.07
12 0.07
13 0.06
14 0.06
15 0.09
16 0.11
17 0.1
18 0.12
19 0.12
20 0.13
21 0.14
22 0.17
23 0.21
24 0.28
25 0.33
26 0.39
27 0.47
28 0.53
29 0.53
30 0.51
31 0.46
32 0.39
33 0.4
34 0.32
35 0.25
36 0.19
37 0.19
38 0.17
39 0.14
40 0.13
41 0.1
42 0.1
43 0.12
44 0.13
45 0.12
46 0.12
47 0.15
48 0.16
49 0.14
50 0.14
51 0.13
52 0.13
53 0.13
54 0.13
55 0.09
56 0.08
57 0.07
58 0.07
59 0.06
60 0.05
61 0.05
62 0.05
63 0.09
64 0.13
65 0.19
66 0.23
67 0.28
68 0.36
69 0.43
70 0.53
71 0.59
72 0.66
73 0.71
74 0.77
75 0.81
76 0.78
77 0.72
78 0.63
79 0.57
80 0.48
81 0.45
82 0.4
83 0.4
84 0.43
85 0.49
86 0.54
87 0.56
88 0.61