Nucleolar Localized Proteins

Nucleolar localized proteins available in the database.

E3KY75

Protein Details
Accession E3KY75    Localization Confidence Medium Confidence Score 10.6
NoLS Segment(s)
PositionSequenceProtein Nature
82-103DDAPKPKKKKDGDARGRGRGRGBasic
NLS Segment(s)
PositionSequence
85-122PKPKKKKDGDARGRGRGRGAVERGGRSRGRGRGRTRGI
Subcellular Location(s) cyto_nucl 13.833, cyto 13.5, nucl 12, cyto_pero 7.666
Family & Domain DBs
InterPro View protein in InterPro  
IPR027141  LSm4/Sm_D1/D3  
IPR010920  LSM_dom_sf  
IPR047575  Sm  
IPR034102  Sm_D1  
IPR001163  Sm_dom_euk/arc  
Gene Ontology GO:0071013  C:catalytic step 2 spliceosome  
GO:0000243  C:commitment complex  
GO:0034715  C:pICln-Sm protein complex  
GO:0071011  C:precatalytic spliceosome  
GO:0034719  C:SMN-Sm protein complex  
GO:0097526  C:spliceosomal tri-snRNP complex  
GO:0005685  C:U1 snRNP  
GO:0005689  C:U12-type spliceosomal complex  
GO:0005686  C:U2 snRNP  
GO:0005687  C:U4 snRNP  
GO:0005682  C:U5 snRNP  
GO:0003723  F:RNA binding  
GO:0006364  P:rRNA processing  
GO:0000387  P:spliceosomal snRNP assembly  
KEGG pgr:PGTG_14996  -  
Pfam View protein in Pfam  
PF01423  LSM  
PROSITE View protein in PROSITE  
PS52002  SM  
CDD cd01724  Sm_D1  
Amino Acid Sequences MKLIRFLMKLNQETVTIELKNGTVVHGTISGVDVAMNTHLKAVKMTVRNREPVQLDSLSIRGSNVRYIILPDSLPLDTLLIDDAPKPKKKKDGDARGRGRGRGAVERGGRSRGRGRGRTRGI
FASTA Sequence
with NoLS information
AlphaFold Structure
with highlighted NoLS
NoLS Predictions per Residue
Residue Number Score
1 0.32
2 0.29
3 0.2
4 0.18
5 0.17
6 0.15
7 0.16
8 0.15
9 0.13
10 0.09
11 0.09
12 0.1
13 0.1
14 0.1
15 0.08
16 0.09
17 0.08
18 0.07
19 0.06
20 0.05
21 0.05
22 0.07
23 0.07
24 0.06
25 0.08
26 0.09
27 0.1
28 0.1
29 0.12
30 0.16
31 0.22
32 0.27
33 0.34
34 0.36
35 0.4
36 0.41
37 0.44
38 0.4
39 0.34
40 0.33
41 0.25
42 0.22
43 0.18
44 0.18
45 0.13
46 0.11
47 0.1
48 0.07
49 0.08
50 0.08
51 0.08
52 0.08
53 0.08
54 0.09
55 0.1
56 0.1
57 0.09
58 0.08
59 0.1
60 0.09
61 0.09
62 0.08
63 0.07
64 0.06
65 0.06
66 0.06
67 0.05
68 0.05
69 0.06
70 0.12
71 0.18
72 0.25
73 0.28
74 0.32
75 0.41
76 0.47
77 0.56
78 0.62
79 0.67
80 0.71
81 0.79
82 0.82
83 0.83
84 0.81
85 0.71
86 0.62
87 0.54
88 0.48
89 0.45
90 0.41
91 0.38
92 0.39
93 0.44
94 0.44
95 0.47
96 0.43
97 0.41
98 0.45
99 0.47
100 0.52
101 0.56
102 0.61